Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015938235.1_cds_XP_016483196.1_74337
CDS Infomation

[gene=LOC107803920] [db_xref=GeneID:107803920] [protein=26S protease regulatory subunit 6A homolog] [protein_id=XP_016483196.1] [location=join(2534..2767,6928..7035,7279..7662,9855..9973,10876..10963,11190..11309,11414..11554,12418..12474,15970..16233)] [gbkey=CDS]
Sequence

ATGGCGACACCGATGGCGGCTGAGGACGGCAACTTCGAAGATGACCTGTATGCCATGTCC
ACTGATGATATTATTAGGGCTGCGCGTTTGCTAGACAACGAAATCCGAATTTTAAAGGAA
GAGCTGCAGAGAACGAATCTAGAGTTGGATTCATTCAAGGAAAAAATAAAGGAGAATCAG
GAGAAAATTAAGCTTAACAAGCAGCTTCCTTACTTGGTCGGCAACATTGTTGAGATTTTG
GAAATGAATCCAGAGGAAGAGGATGAGGAGGATGGTGCAAATATTGATCTTGACTCGCAA
AGGAAGGGCAAATGTGTTGTACTGAAAACGTCCACGCGCCAGACAATTTTCCTGCCTGTT
GTTGGCCTTGTTGACCCGGATAAGTTAAAGCCTGGTGATCTTGTCGGAGTAAACAAAGAC
AGTTATTTGATATTAGACACATTGCCATCTGAATATGATTCACGGGTAAAGGCAATGGAA
GTTGATGAAAAACCAACTGAAGACTACAATGATATTGGAGGTCTGGAGAAACAGATTCAA
GAACTCGTAGAGGCAATTGTTTTACCTATGACACACAAAGAACGGTTCCAGAAATTAGGC
GTCCGTCCTCCAAAAGGAGTCCTTTTGTATGGGCCTCCTGGGACTGGGAAAACTCTCATG
GCCCGAGCCTGTGCTGCACAGACAAATGCCACTTTTCTTAAGCTAGCAGGGCCGCAGCTT
GTGCAGATGTTCATTGGAGATGGAGCAAAACTTGTCCGTGATGCTTTCCAGCTGGCAAAG
GAGAAATCACCTTGCATCATTTTTATTGATGAGATTGATGCTATAGGCACAAAGCGTTTT
GATAGTGAAGTTAGTGGGGATCGAGAGGTCCAACGAACTATGTTGGAGTTACTTAATCAG
CTCGATGGTTTCAGCAGTGACGATAGGATAAAGGTTATAGCAGCAACAAACCGAGCTGAT
ATTTTGGATCCTGCTTTGATGCGTTCTGGTCGATTGGATCGTAAAATTGAGTTCCCCCAT
CCCACAGAGGAAGCTAGGGCTCAAATCTTGCAGATTCACTCTAGAAAGATGAATGTTCAC
CCCGATGTCAATTTCGAGGAATTGGCTCGATCCACAGATGATTTTAACGGGGCTCAATTA
AAAGCTGTATGTGTTGAGGCAGGGATGTTAGCACTCCGCCGTGATGCCACTGAGGTTACC
CATGAAGATTTCAATGAAGGTATCATTCAGGTTCAGGCTAANTGTGAAAGCATAGAAATG
GCGAAGACCTCAAATTTGGTACCTCAAAACACTGCACCGACGACTTCTTCCTCGGCAACA
GGAATCGAGGCAGTGCCTCCAGTAGTAGCTTCAGGAGCTCCCCGTACAGATTTAGTCCCC
AGCGGCCGCTCCATAGATAACTACTTCAAGGTCGAGAAAGTTTTCGCACAAGGAGATCGG
GGTGAGGAAGCGCGGAGGTATGTTTGCTCCATTACTGAGGAGACACTTAAAGTTGTCCGA
AAGGACTACAAATAG

Peptide Sequence

PEP ID

XP_016483196.1
PEP Infomation

PREDICTED: 26S protease regulatory subunit 6A homolog [Nicotiana tabacum]
Sequence

MATPMAAEDGNFEDDLYAMSTDDIIRAARLLDNEIRILKEELQRTNLELDSFKEKIKENQ
EKIKLNKQLPYLVGNIVEILEMNPEEEDEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV
VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ
ELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL
VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ
LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARAQILQIHSRKMNVH
PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDFNEGIIQVQAXCESIEM
AKTSNLVPQNTAPTTSSSATGIEAVPPVVASGAPRTDLVPSGRSIDNYFKVEKVFAQGDR
GEEARRYVCSITEETLKVVRKDYK

Transcript Sequence

Gene sequence data has not been registered.